Program Listing for File potentialHarmonic.hpp#
↰ Return to documentation for file (pymembrane/cppmodule/src/potentials/potentialHarmonic.hpp
)
#ifndef __POTENTIALHARMONIC_HPP__
#define __POTENTIALHARMONIC_HPP__
#include "computeforceclass.hpp"
#include "../system/systemclass.hpp"
#include "../mesh/computegeometry.hpp"
class ComputeVertexHarmonicEnergy : public ComputeForceClass
{
public:
ComputeVertexHarmonicEnergy(SystemClass &system) : ComputeForceClass(system)
{
m_name = "Harmonic";
m_type = "edge";
this->set_default_properties();
}
~ComputeVertexHarmonicEnergy() {}
void set_default_properties(void) override
{
pymemb::vector<real> _k(NUM_TYPES_ALLOWED, 0.0);
m_k = _k;
pymemb::vector<real> _l0(NUM_TYPES_ALLOWED, 1.0);
m_l0 = _l0;
}
using ComputeForceClass::set_property;
void set_property(std::map<std::string, std::map<std::string, std::string>> ®ion_map) override
{
for (const auto &item : region_map)
{
if (item.first.compare("k") == 0)
{
pymemb::vector<real> _k = util::from_dict_to_vector_types(pymemb::copy(m_k), item.second);
m_k = _k;
}
else if (item.first.compare("l0") == 0)
{
pymemb::vector<real> _l0 = util::from_dict_to_vector_types(pymemb::copy(m_l0), item.second);
m_l0 = _l0;
}
else
this->print_warning_property_name(item.first);
}
}
std::map<std::string, std::string> get_info(void) override
{
std::map<std::string, std::string> value;
value["name"] = m_name;
value["type"] = m_type;
value["k"] = util::to_string_vec(m_k);
value["l0"] = util::to_string_vec(m_l0);
return value;
}
void compute_energy(void) override;
void compute(void) override;
real compute_edge_energy(int) override;
real compute_vertex_energy(int) override;
void compute_stress(void) override;
void compute_atomic_stress(void) override;
private:
pymemb::vector<real> m_k;
pymemb::vector<real> m_l0;
};
#endif